STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0930COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: bcv:Bcav_2331 protein of unknown function zinc metallopeptidase putative; PFAM: protein of unknown function zinc metallopeptidase putative; SPTR: D0WMK1 Metallopeptidase, zinc binding; PFAM: Putative neutral zinc metallopeptidase. (297 aa)    
Predicted Functional Partners:
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
      
 0.695
Arch_0929
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: bcv:Bcav_2326 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WMK2 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
       0.595
Arch_0998
COGs: COG0433 ATPase; InterPro IPR008571; KEGG: bcv:Bcav_1736 protein of unknown function DUF853 NPT hydrolase putative; PFAM: protein of unknown function DUF853 NPT hydrolase putative; SPTR: D0WN89 Putative ATP-binding protein; PFAM: Bacterial protein of unknown function (DUF853).
 
     0.576
aroK
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
       0.493
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.