STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_0960ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR017871:IPR003593:IPR013563; KEGG: apv:Apar_0932 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: A7BBZ2 Putative uncharacterized protein; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region. (269 aa)    
Predicted Functional Partners:
Arch_0961
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR010066:IPR003439:IPR000515:IPR017871:IPR 003593:IPR013563; KEGG: ele:Elen_2148 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: A7BBZ1 Putative uncharacterized protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC trans [...]
 
  
0.990
Arch_0962
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ele:Elen_2147 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C2GJT1 ABC superfamily ATP binding cassette transporter, membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.973
Arch_0054
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: pac:PPA2065 dipeptide transport system permease protein DppC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q6A635 Dipeptide transport system permease protein DppC; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.947
Arch_1443
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sma:SAV_3046 peptide ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0W836 Peptide ABC superfamily ATP binding cassette transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.945
Arch_0963
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: ccu:Ccur_06680 ABC-type dipeptide transport system, periplasmic component; PFAM: extracellular solute-binding protein family 5; SPTR: A7BBY9 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
 0.930
Arch_0053
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: pac:PPA2064 dipeptide transport system permease protein DppB; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q6A636 Dipeptide transport system permease protein DppB; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.881
Arch_0959
COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR020625:IPR013785:IPR002220; KEGG: ckp:ckrop_1871 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: C0W1Z6 Possible dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
     0.874
Arch_1444
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sro:Sros_7099 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C0VZP1 Peptide ABC superfamily ATP binding cassette transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.866
Arch_0716
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR011527:IPR003593:IPR003439:IPR017940:IPR 001140; KEGG: ami:Amir_3754 ABC transporter transmembrane region; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C1RL82 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
     
0.840
Arch_1527
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439:IPR003593; KEGG: bln:Blon_1030 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B7GQP6 ABC transporter related; PFAM: ABC transporter.
    
0.833
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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