STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1039KEGG: fma:FMG_0910 hypothetical protein; SPTR: B0S1T8 Putative uncharacterized protein. (187 aa)    
Predicted Functional Partners:
Arch_0790
Protein of unknown function DUF214; InterPro IPR003838; KEGG: cdl:CDR20291_1805 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: B6FLT8 Putative uncharacterized protein; PFAM: Predicted permease.
  
     0.762
Arch_0788
Protein of unknown function DUF214; InterPro IPR003838; KEGG: cdl:CDR20291_1803 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: Q187I6 ABC transporter, permease protein; manually curated; PFAM: Predicted permease.
  
     0.758
Arch_0789
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: cdl:CDR20291_1804 abc transporter, atp-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q187I8 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
     0.730
Arch_1146
KEGG: apr:Apre_0119 hypothetical protein; SPTR: C7RFB0 Putative membrane protein.
  
     0.478
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.