STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1043KEGG: pac:PPA1589 hypothetical protein; SPTR: C2KNY1 Putative uncharacterized protein. (190 aa)    
Predicted Functional Partners:
Arch_0519
DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterProIPR002052:IPR002295:IPR003115:IPR002941:IPR 015840; KEGG: pac:PPA1586 ParB family DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: C2KNX9 ParB family DNA methylase; manually curated; PFAM: ParB-like nuclease domain; DNA methylase.
 
    0.806
Arch_1566
KEGG: pac:PPA1585 phage-associated protein; SPTR: C8RU49 Virulence-related protein.
 
     0.773
Arch_1548
COGs: COG4653 phage phi-C31 gp36 major capsid-like protein; InterPro IPR006444; KEGG: tex:Teth514_1254 HK97 family phage major capsid protein; PFAM: major capsid protein HK97; SPTR: C8RU58 HK97 family major capsid protein; TIGRFAM: phage major capsid protein, HK97 family; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
 
    0.772
Arch_0457
HNH endonuclease; InterPro IPR002711:IPR003615; KEGG: cdi:DIP2153 putative bacteriophage holin protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C2KNY6 Possible bacteriophage endonuclease; PFAM: HNH endonuclease.
 
    0.676
Arch_0523
Portal protein; COGs: COG4695 Phage-related protein; InterPro IPR006944; KEGG: tex:Teth514_1252 HK97 family phage portal protein; PFAM: portal protein; SPTR: C2KNX2 HK97 family portal protein; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
    0.675
Arch_0512
HNH endonuclease; InterPro IPR002711:IPR003615; KEGG: cdi:DIP2153 putative bacteriophage holin protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: C2KNY6 Possible bacteriophage endonuclease; PFAM: HNH endonuclease.
 
    0.641
Arch_1550
Phage portal protein, HK97 family; COGs: COG4695 Phage-related protein; InterPro IPR006944:IPR006427; KEGG: det:DET1087 HK97 family portal protein, putative; PFAM: portal protein; SPTR: C2KNX2 HK97 family portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
    0.640
Arch_1547
InterPro IPR006450; KEGG: bca:BCE_0402 phage protein DNA packaging protein; SPTR: C2KNW9 Possible phage protein (Possible DNA packaging); TIGRFAM: uncharacterized phage protein (possible DNA packaging); PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: uncharacterized phage protein (possible DNA packaging).
 
    0.624
Arch_1546
KEGG: tex:Teth514_1257 phage head-tail adaptor, putative; SPTR: C8RU60 Phage head-tail adaptor; PFAM: Phage head-tail joining protein.
 
    0.617
Arch_1544
KEGG: cth:Cthe_1624 hypothetical protein; SPTR: C8RU62 Putative uncharacterized protein.
 
    0.615
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.