STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1054COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR014021:IPR001650:IPR014001:IPR007409:IPR 006935:IPR013670; KEGG: pnu:Pnuc_1134 EcoEI R domain-containing protein; PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; helicase domain protein; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: A4SXY6 EcoEI R, C-terminal domain protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); EcoEI R protein C-terminal; Type II [...] (794 aa)    
Predicted Functional Partners:
Arch_1053
N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052:IPR003356:IPR002296; KEGG: apa:APP7_1530 type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; SPTR: B3H2F7 Type I restriction-modification system, M subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
 
 
 0.980
Arch_1052
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: vei:Veis_1015 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: B2N0G8 Putative type I restriction-modification system, S subunit; PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.979
Arch_1051
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: bpt:Bpet3989 type I restriction-modification system, S subunit; PFAM: restriction modification system DNA specificity domain; SPTR: A9I6S0 Type I restriction-modification system, S subunit; manually curated; PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.972
Arch_1055
Hypothetical protein; KEGG: ACAS2; acetyl-coenzyme a synthetase; SPTR: B8C359 Acetyl-coenzyme a synthetase (Fragment).
       0.773
Arch_1580
N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: dvl:Dvul_0488 N-6 DNA methylase; PFAM: N-6 DNA methylase; SPTR: C8RRG5 Type I restriction-modification system, M subunit N-6 adenine-specific DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
 
 0.682
Arch_0503
InterPro IPR002296; KEGG: ajs:Ajs_0195 type III restriction system methylase; SPTR: C0W730 Type III restriction system methylase; PFAM: N-6 DNA Methylase.
  
 
 0.629
Arch_1050
Hypothetical protein; KEGG: rsq:Rsph17025_1504 RND family efflux transporter MFP subunit; SPTR: D0YUX9 Putative uncharacterized protein.
       0.608
Arch_1057
Domain of unknown function DUF1814; InterPro IPR014942; KEGG: ere:EUBREC_3503 hypothetical protein; PFAM: Domain of unknown function DUF1814; SPTR: A8RVS1 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1814).
     
 0.424
Arch_1056
KEGG: ere:EUBREC_3502 hypothetical protein; SPTR: C0FM79 Putative uncharacterized protein.
       0.422
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.