STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcpPeptidyl-dipeptidase Dcp; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: bcv:Bcav_2254 peptidyl-dipeptidase DCP; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: Peptidyl-dipeptidase Dcp; SPTR: C7SZ49 Peptidyl-dipeptidase; PFAM: Peptidase family M3. (669 aa)    
Predicted Functional Partners:
gluSR
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
   
  
 0.743
Arch_1095
Transcriptional regulator, IclR family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: xce:Xcel_2358 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: D1BVQ5 Transcriptional regulator, IclR family; manually curated; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
  
    0.647
Arch_1096
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sco:SCO2132 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: D0WNF3 Glycosyl transferase; PFAM: Glycosyl transferases group 1.
  
    0.614
Arch_1093
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: art:Arth_2516 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: D0WNE3 1-acylglycerol-3-phosphate O-acyltransferase, putayive; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
     0.485
Arch_0167
Prolyl oligopeptidase; COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR001375:IPR004106:IPR002470; KEGG: sml:Smlt4084 putative exported oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; PRIAM: Prolyl oligopeptidase; SPTR: B2FHW1 Putative exported oligoPEPTIDASE; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family.
  
 
 0.435
murA
UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.400
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.