STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1103Protein of unknown function DUF77; COGs: COG0011 conserved hypothetical protein; InterPro IPR016198:IPR002767; KEGG: cms:CMS_2065 hypothetical protein; PFAM: protein of unknown function DUF77; SPTR: A4AK94 Putative uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106. (103 aa)    
Predicted Functional Partners:
Arch_1102
KEGG: bcv:Bcav_1559 hypothetical protein; SPTR: C1RFW2 Putative uncharacterized protein.
       0.773
Arch_1101
Fumarylacetoacetate (FAA) hydrolase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR011234:IPR002529; KEGG: bcv:Bcav_1564 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas E; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: C5C3C1 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family.
       0.567
Arch_0984
KEGG: aau:AAur_2236 hypothetical protein; SPTR: D0WN61 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3097).
 
     0.516
gluSR
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.515
aroK
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
       0.414
Arch_0818
COGs: COG2339 membrane protein; KEGG: bcv:Bcav_1985 membrane protein; SPTR: C5C5P9 Membrane protein.
  
     0.400
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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