STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1108KEGG: bcv:Bcav_2729 hypothetical protein; SPTR: D0WNI1 Putative uncharacterized protein. (176 aa)    
Predicted Functional Partners:
Arch_1107
KEGG: sfu:Sfum_2880 spermidine synthase; SPTR: A0LMA5 Spermidine synthase with an N-terminal membrane domain-like.
       0.543
Arch_0756
KEGG: bcv:Bcav_1909 hypothetical protein; SPTR: D0WQK7 Putative transcriptional regulatory protein.
  
     0.526
crgA
Protein of unknown function UPF0233; Involved in cell division; Belongs to the CrgA family.
  
     0.525
Arch_1423
COGs: COG1216 glycosyltransferase; KEGG: bcv:Bcav_1207 glycosyl transferase domain-containing protein; SPTR: D0WPI1 Putative glycosyl transferase domain protein.
  
     0.489
Arch_1106
COGs: COG1225 Peroxiredoxin; InterPro IPR012336:IPR017936:IPR012335:IPR000866; KEGG: bcv:Bcav_2672 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: D0WNI0 Bacterioferritin comigratory protein; PFAM: AhpC/TSA family.
       0.486
Arch_0664
KEGG: krh:KRH_14920 hypothetical protein; SPTR: D0WQW9 Membrane protein; PFAM: Protein of unknown function (DUF3040).
  
     0.481
Arch_1641
DSBA oxidoreductase; InterPro IPR012336:IPR001853:IPR012335; KEGG: xce:Xcel_2947 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: D0WJV3 Putative uncharacterized protein; PFAM: DSBA-like thioredoxin domain.
  
    0.478
Arch_0450
Hypothetical protein; KEGG: bcv:Bcav_2644 ATP-binding membrane protein; SPTR: D0WRE5 Putative ATP-binding membrane protein; PFAM: Elongation factor Tu GTP binding domain.
 
     0.463
Arch_0107
COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: bcv:Bcav_0032 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1RFN6 FHA domain-containing protein; PFAM: Protein of unknown function (DUF2662); FHA domain.
  
     0.448
Arch_0132
Conserved hypothetical protein; COGs: COG0392 integral membrane protein; InterPro IPR005242:IPR018170; KEGG: bcv:Bcav_4032 integral membrane protein; PFAM: conserved hypothetical protein; SPTR: D0WKF9 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
    0.443
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.