STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1128COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; KEGG: cdi:DIP0284 ABC transporter; SPTR: Q6NJV9 Putative ABC-transport system iron-binding secreted protein. (804 aa)    
Predicted Functional Partners:
Arch_1127
ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR017871:IPR003593; KEGG: pct:PC1_1544 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6DDX5 ABC transporter related; PFAM: ABC transporter.
 
 
 0.989
Arch_0639
COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: xce:Xcel_2994 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A3TLH6 Iron(III)-transport system permease protein sfuB; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.977
potA
ABC transporter related protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.973
Arch_0640
Extracellular solute-binding protein family 1; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: xce:Xcel_2993 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: D1BZA2 Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
 
 
0.961
Arch_0157
ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: mlu:Mlut_19480 ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C5C6U1 ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.734
Arch_1129
Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR016196:IPR005829:IPR000849:IPR011701; KEGG: ckp:ckrop_0413 glycerol-3-phosphate transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C4LH87 Glycerol-3-phosphate transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter family protein.
 
    0.705
Arch_0156
COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: bcv:Bcav_3808 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C5C4C6 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.686
Arch_0631
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: pac:PPA0782 ABC-type transporter, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W1M7 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
  
  
 0.620
Arch_0738
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: cdi:DIP0585 putative iron transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q6NJ28 Putative iron transport system ATP-binding protein; PFAM: ABC transporter.
  
  
 0.620
Arch_0223
KEGG: bcv:Bcav_3418 hypothetical protein; SPTR: C5C235 Putative uncharacterized protein.
  
     0.619
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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