STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1135COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: abo:ABO_1697 nitrobenzoate reductase, putative; PFAM: nitroreductase; SPTR: A7BEP3 Putative uncharacterized protein; manually curated; PFAM: Nitroreductase family. (228 aa)    
Predicted Functional Partners:
Arch_1602
KEGG: xce:Xcel_1905 ABC-2 type transporter; SPTR: D1BT82 ABC-2 type transporter.
  
  
 0.599
Arch_1136
Peptidase U61 LD-carboxypeptidase A; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: xce:Xcel_3337 peptidase U61 LD-carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A; SPTR: D1BRS1 Peptidase U61 LD-carboxypeptidase A; PFAM: LD-carboxypeptidase.
       0.564
Arch_0284
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: bcv:Bcav_3247 O-succinylbenzoic acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: D0WMF4 O-succinylbenzoate--CoA ligase; PFAM: AMP-binding enzyme.
   
 
 0.430
Arch_0659
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR018062:IPR020845:IPR000873; KEGG: saq:Sare_2221 acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: D0WQX6 CoA ligase; PFAM: AMP-binding enzyme.
   
 
 0.430
Arch_1361
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR017871; KEGG: ele:Elen_1832 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: D0WP04 CoA ligase; PFAM: AMP-binding enzyme.
   
 
 0.430
Arch_1447
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR020845; KEGG: sen:SACE_2795 putative feruloyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: D0WPP1 Fatty-acid--CoA ligase; PFAM: AMP-binding enzyme.
   
 
 0.430
Arch_1670
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763:IPR016156:IPR013027:IPR004099; KEGG: cdi:DIP1748 putative oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C2CQM4 CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain.
     
 0.415
Arch_0077
InterPro IPR018674; KEGG: lxx:Lxx05060 hypothetical protein; PFAM: Protein of unknown function DUF2142, membrane; SPTR: A7BEE9 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2142).
  
     0.409
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.