STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1136Peptidase U61 LD-carboxypeptidase A; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: xce:Xcel_3337 peptidase U61 LD-carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A; SPTR: D1BRS1 Peptidase U61 LD-carboxypeptidase A; PFAM: LD-carboxypeptidase. (346 aa)    
Predicted Functional Partners:
Arch_1135
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: abo:ABO_1697 nitrobenzoate reductase, putative; PFAM: nitroreductase; SPTR: A7BEP3 Putative uncharacterized protein; manually curated; PFAM: Nitroreductase family.
       0.564
Arch_0324
KEGG: mpa:MAP0512c hypothetical protein; SPTR: Q743S9 Putative uncharacterized protein.
  
     0.503
Arch_1137
KEGG: cpy:Cphy_0999 hypothetical protein; SPTR: D0WRJ8 Putative uncharacterized protein.
       0.486
Arch_1449
KEGG: kse:Ksed_02110 NUDIX family protein; SPTR: C7NJG7 NUDIX family protein.
  
     0.415
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.