STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1148KEGG: bfa:Bfae_06470 endonuclease/exonuclease/phosphatase family protein; SPTR: A7B9D7 Putative uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor domain. (453 aa)    
Predicted Functional Partners:
Arch_0933
Cysteine desulfurase, SufS subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR015424:IPR015421:IPR010970:IPR000192; KEGG: xce:Xcel_1361 cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SPTR: D0WMJ8 Cysteine desulfurase SufS; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.824
Arch_1458
PTS system, glucose subfamily, IIA subunit; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterProIPR001127:IPR001996:IPR013013:IPR018113:IPR 003352:IPR011055; KEGG: cdi:DIP1151 PTS system, glucose-specific IIABC component; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: C2CRZ1 Protein-N(Pi)-phosphohistidine--sugar phosphotransferase; TIGRFAM: PTS system, glucose subfamil [...]
  
  
 0.635
Arch_1147
KEGG: cur:cur_1838 hypothetical protein; SPTR: D0WP75 Putative integral membrane protein.
       0.567
Arch_1146
KEGG: apr:Apre_0119 hypothetical protein; SPTR: C7RFB0 Putative membrane protein.
       0.553
Arch_1149
Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524:IPR011991; KEGG: apr:Apre_0169 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C0W8Y6 GntR family transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
       0.459
Arch_1150
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: smu:SMU.1194 putative ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W8Y7 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
       0.459
Arch_1151
Hypothetical protein; KEGG: acl:ACL_0342 ABC-type transport system, permease component, putative; SPTR: A7BEJ1 Putative uncharacterized protein.
       0.459
Arch_0174
LPXTG-motif cell wall anchor domain protein; COGs: COG2374 extracellular nuclease; InterPro IPR005135:IPR019931; KEGG: cgb:cg2868 extracellular nuclease; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: C0WGX8 Endonuclease/exonuclease/phosphatase; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: LPXTG-motif cell wall anchor domain.
 
     0.424
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.