STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1152ABC transporter related protein; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: rmu:RMDY18_18540 ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6R5X7 Glutamine transport ATP-binding protein GlnQ; PFAM: ABC transporter. (249 aa)    
Predicted Functional Partners:
Arch_1153
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: krh:KRH_01090 putative amino acid ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B2GK57 Putative amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Gl [...]
 0.998
Arch_1154
Extracellular solute-binding protein family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638; KEGG: rmu:RMDY18_18580 ABC-type amino acid transport/signal transduction system, periplasmic component; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: C6R5X5 L-cystine-binding protein TcyA; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
 0.993
Arch_0125
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: xce:Xcel_0100 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: D0WQP0 ABC amino acid transporter, permease component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/ [...]
 
 0.966
Arch_0126
Extracellular solute-binding protein family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320:IPR001638:IPR018313; KEGG: bln:Blon_2021 extracellular solute-binding protein, family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: B7GUE2 Extracellular solute-binding protein, family 3; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 
 
 0.854
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.534
Arch_1155
Hypothetical protein; InterPro IPR003731; KEGG: nca:Noca_2700 hypothetical protein; SPTR: C2BVE9 Putative uncharacterized protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
       0.482
Arch_1523
ABC transporter related protein; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: rop:ROP_50810 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WQ28 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
    
0.443
Arch_1010
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.410
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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