STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1159COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR011257:IPR005019; KEGG: blj:BLD_0730 3-methyladenine DNA glycosylase; PFAM: methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: B3DSQ7 3-methyladenine DNA glycosylase; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I. (187 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.756
Arch_0269
HhH-GPD family protein; COGs: COG1194 A/G-specific DNA glycosylase; InterProIPR003265:IPR003583:IPR003651:IPR011257:IPR 004036; KEGG: bcv:Bcav_3282 HhH-GPD family protein; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; Helix-hairpin-helix DNA-binding class 1; SPTR: D0WM02 A/G-specific adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase.
     
 0.551
Arch_1260
KEGG: xce:Xcel_0979 hypothetical protein; SPTR: C1RFG8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3117).
     
 0.495
Arch_1814
Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: jde:Jden_2552 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: C7R3N9 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
      
 0.465
Arch_1079
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
      
 0.455
Arch_1160
MgtC/SapB transporter; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: bcv:Bcav_0823 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: D0WQ67 MgtC/SapB transporter; PFAM: MgtC family.
       0.419
Arch_1161
Hypothetical protein; KEGG: fra:Francci3_0231 oxidoreductase FAD/NAD(P)-binding; SPTR: Q2JGH2 Oxidoreductase FAD/NAD(P)-binding.
       0.419
Arch_1158
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
       0.417
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.