STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1173KEGG: ele:Elen_1391 membrane protein; SPTR: C0BR54 Putative uncharacterized protein. (343 aa)    
Predicted Functional Partners:
Arch_1172
Transcriptional regulator, TetR family; InterPro IPR009057:IPR001647:IPR012287; KEGG: blj:BLD_1290 AcrR-type transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Q8G6X9 Possible TetR-type transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family.
 
     0.926
Arch_0085
InterPro IPR002797; KEGG: apv:Apar_0999 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: C0W8F7 Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.
  
     0.630
Arch_0083
Transcriptional regulator, MarR family; COGs: COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes; InterPro IPR000835:IPR002573:IPR011009; KEGG: apv:Apar_1003 transcriptional regulator, MarR family; PFAM: Choline/ethanolamine kinase; regulatory protein MarR; SPTR: A7BEG2 Putative uncharacterized protein; PFAM: Choline/ethanolamine kinase; Nucleotidyl transferase.
  
     0.595
Arch_1176
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: car:cauri_0014 putative N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C2CSR1 Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
 
     0.465
Arch_0339
KEGG: pac:PPA1037 hypothetical protein; SPTR: C0W060 Putative uncharacterized protein.
 
     0.455
galT
COGs: COG4468 Galactose-1-phosphate uridyltransferase; InterPro IPR005849:IPR005850; KEGG: blo:BL1643 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: Q8G3W0 Galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 2.
 
     0.422
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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