STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1256Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR009010:IPR006311:IPR011888:IPR017909:IPR 006655:IPR019546:IPR006963:IPR006656:IPR006657; KEGG: pac:PPA0517 anaerobic dimethyl sulfoxide reductase chain A; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; SPTR: C2BU50 Possible Trimethylamine-N-oxide reductase (Cytochrome c); TIGRFAM: anaerobic dimethy [...] (850 aa)    
Predicted Functional Partners:
Arch_1255
Dimethylsulfoxide reductase, chain B; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR014297:IPR017896:IPR017900:IPR001450; KEGG: pac:PPA0516 anaerobic dimethyl sulfoxide reductase, chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C2BU49 Anaerobic dimethyl sulfoxide reductase, chain B; TIGRFAM: dimethylsulfoxide reductase, chain B; PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit.
 0.999
Arch_1254
COGs: COG3302 DMSO reductase anchor subunit; InterPro IPR007059; KEGG: pac:PPA0515 anaerobic dimethyl sulfoxide reductase chain C; PFAM: DMSO reductase anchor subunit (DmsC); SPTR: C2BU48 Anaerobic dimethyl sulfoxide reductase chain C; PFAM: DMSO reductase anchor subunit (DmsC).
 
 0.996
Arch_1253
Cytoplasmic chaperone TorD family protein; COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; InterPro IPR010395; KEGG: pac:PPA0497 putative component of anaerobic dehydrogenase; PFAM: cytoplasmic chaperone TorD family protein; SPTR: Q6AAG6 Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
 
 0.958
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.938
Arch_1252
InterPro IPR017896:IPR017900:IPR001450; KEGG: cur:cur_0829 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C2BU46 Putative uncharacterized protein.
 
  
 0.906
Arch_1475
COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR011031:IPR005126:IPR017571; KEGG: mxa:MXAN_2210 putative cytochrome c nitrite reductase, small subunit NrfH; PFAM: NapC/NirT cytochrome c domain protein; SPTR: Q1DA91 Putative cytochrome c nitrite reductase, small subunit NrfH; TIGRFAM: cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit.
  
 
 0.791
Arch_1249
COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR003448:IPR001453; KEGG: xce:Xcel_1817 molybdenum cofactor synthesis domain protein; PFAM: molybdopterin biosynthesis MoaE protein; molybdopterin binding domain; SPTR: D0WL91 Molybdopterin converting factor, subunit 2; PFAM: Probable molybdopterin binding domain; MoaE protein; TIGRFAM: molybdenum cofactor synthesis domain.
 
  
 0.743
Arch_1257
Putative transcriptional regulator, TetR family; InterPro IPR009057:IPR001647; KEGG: oih:OB3184 transcriptional regulator; SPTR: C2BU51 Putative uncharacterized protein.
 
   
 0.717
Arch_1245
NifC-like ABC-type porter; COGs: COG4149 ABC-type molybdate transport system permease component; InterProIPR006469:IPR011867:IPR003439:IPR000515:IPR 003593; KEGG: sgr:SGR_3501 putative ABC transporter ATPase and permease component; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; SMART: AAA ATPase; SPTR: A7BBD7 Putative uncharacterized protein; TIGRFAM: NifC-like ABC-type porter; molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; ABC transporter; TIGRFAM: molyb [...]
 
   
 0.615
Arch_1259
KEGG: pac:PPA0514 putative molybdopterin-guanine dinucleotide biosynthesis protein; SPTR: C0W5Q3 Putative uncharacterized protein.
 
   
 0.608
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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