STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1284Phage shock protein C, PspC; InterPro IPR007168; KEGG: rsa:RSal33209_0977 putative stress-responsive transcriptional regulator; PFAM: PspC domain protein; SPTR: C0W6P9 Possible phage shock protein C, PspC; PFAM: PspC domain; TIGRFAM: LPXTG-motif cell wall anchor domain. (445 aa)    
Predicted Functional Partners:
Arch_1624
COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: xce:Xcel_2934 phage shock protein A, PspA; PFAM: PspA/IM30 family protein; SPTR: D0WJT6 PspA/IM30 family protein; PFAM: PspA/IM30 family.
  
 
 0.946
Arch_1283
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: bcv:Bcav_3034 putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: C0W6Q0 Signal transduction histidine kinase; PFAM: PspC domain.
 
  
 0.925
Arch_1285
Hypothetical protein; KEGG: chl:Chy400_1644 polysaccharide biosynthesis protein; SPTR: C0W6P8 Putative uncharacterized protein.
       0.769
Arch_0137
Membrane protein of unknown function; COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: bcv:Bcav_3970 membrane protein of unknown function; PFAM: membrane protein of unknown function; SPTR: C5C571 Putative uncharacterized protein; PFAM: Membrane protein of unknown function.
  
    0.729
Arch_1282
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR000792:IPR001789:IPR011991:IPR011006:IPR 016032; KEGG: jde:Jden_0656 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; SPTR: C7R1A5 Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
  
 0.679
Arch_0289
Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254:IPR009003:IPR001940; KEGG: bcv:Bcav_3234 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: C5C0T2 2-alkenal reductase; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF).
 
  
 0.605
Arch_0413
InterPro IPR003838; KEGG: bcv:Bcav_2825 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C5V906 ABC transporter integral membrane protein; PFAM: Predicted permease.
 
     0.586
Arch_1281
Maltose O-acetyltransferase; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451:IPR011004:IPR018357; KEGG: tfu:Tfu_1260 maltose O-acetyltransferase; SPTR: D0YUJ3 Maltose O-acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).
  
    0.553
Arch_0765
InterPro IPR016181:IPR000182; KEGG: bcv:Bcav_1925 GCN5-related protein N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: D0WQJ2 Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family.
 
     0.540
Arch_1224
KEGG: xce:Xcel_1029 TadE family protein; SPTR: A1R814 Putative TadE-like family protein.
  
     0.531
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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