STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1306KEGG: cpf:CPF_0994 hypothetical protein; SPTR: B1RAN5 Putative membrane protein. (123 aa)    
Predicted Functional Partners:
Arch_1056
KEGG: ere:EUBREC_3502 hypothetical protein; SPTR: C0FM79 Putative uncharacterized protein.
  
     0.693
Arch_1057
Domain of unknown function DUF1814; InterPro IPR014942; KEGG: ere:EUBREC_3503 hypothetical protein; PFAM: Domain of unknown function DUF1814; SPTR: A8RVS1 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1814).
  
     0.673
Arch_1305
Transposase IS3/IS911 family protein; InterPro IPR002514; KEGG: kse:Ksed_22010 transposase; PFAM: transposase IS3/IS911 family protein; SPTR: A7B9Y6 Putative uncharacterized protein; PFAM: Transposase.
       0.449
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.429
Arch_1185
InterPro IPR011733; KEGG: mpa:MAP3733c hypothetical protein; PFAM: Conserved hypothetical CHP02185 integral membrane family protein; SPTR: A7BC09 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Hypothetical bacterial integral membrane protein (Trep_Strep); TIGRFAM: conserved hypothetical integral membrane protein TIGR02185.
 
     0.406
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.