STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1353Conserved hypothetical protein; COGs: COG2440 Ferredoxin-like protein; InterPro IPR012206:IPR017896; KEGG: dsy:DSY3795 hypothetical protein; SPTR: D0WNZ6 Ferredoxin. (98 aa)    
Predicted Functional Partners:
Arch_1355
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308:IPR014731; KEGG: pac:PPA2213 putative electron transfer flavoprotein, carnitine metabolism (FixB protein); PFAM: Electron transfer flavoprotein alpha subunit; SPTR: D0WNZ8 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.986
Arch_1356
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR012255:IPR014730:IPR014729; KEGG: pac:PPA2214 putative electron transfer flavoprotein (FixA protein); PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ9 Putative electron transfer flavoprotein; PFAM: Electron transfer flavoprotein domain.
 
 0.981
Arch_1354
Electron-transferring-flavoproteindehydrogenase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076:IPR003042; KEGG: pac:PPA2212 putative electron transfer flavoprotein-quinone oxidoreductase (FixC protein); PFAM: FAD dependent oxidoreductase; PRIAM: Electron-transferring-flavoprotein dehydrogenase; SPTR: D0WNZ7 FixC protein; PFAM: FAD dependent oxidoreductase.
 
 
 0.972
Arch_0585
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014729:IPR014730:IPR012255; KEGG: pac:PPA2214 putative electron transfer flavoprotein (FixA protein); PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ9 Putative electron transfer flavoprotein; PFAM: Electron transfer flavoprotein domain.
 
 0.954
Arch_0586
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731:IPR001308; KEGG: pac:PPA2213 putative electron transfer flavoprotein, carnitine metabolism (FixB protein); PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ8 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.941
Arch_0587
Electron-transferring-flavoproteindehydrogenase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042:IPR006076; KEGG: pac:PPA2212 putative electron transfer flavoprotein-quinone oxidoreductase (FixC protein); PFAM: FAD dependent oxidoreductase; PRIAM: Electron-transferring-flavoprotein dehydrogenase; SPTR: D0WNZ7 FixC protein; PFAM: FAD dependent oxidoreductase.
 
 
 0.883
Arch_1363
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR013786:IPR 013764:IPR009100:IPR009075; KEGG: drm:Dred_0570 crotonobetainyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: D0WP06 Crotonobetainyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
 
 0.602
Arch_0292
Geranylgeranyl reductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076:IPR011777:IPR003042; KEGG: bcv:Bcav_3230 geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; SPTR: D0WMG0 Putative monooxygenase, FAD-binding; TIGRFAM: geranylgeranyl reductase; manually curated; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family.
  
 
 0.503
Arch_1357
Transcriptional regulator, TetR family; InterPro IPR001647:IPR012287:IPR009057; KEGG: tfu:Tfu_1467 hypothetical protein; PFAM: regulatory protein TetR; SPTR: D0WP01 Transcriptional regulatory protein, TetR family; PFAM: Bacterial regulatory proteins, tetR family.
       0.475
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
       0.435
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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