STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1363COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR013786:IPR 013764:IPR009100:IPR009075; KEGG: drm:Dred_0570 crotonobetainyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: D0WP06 Crotonobetainyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain. (377 aa)    
Predicted Functional Partners:
Arch_0586
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731:IPR001308; KEGG: pac:PPA2213 putative electron transfer flavoprotein, carnitine metabolism (FixB protein); PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ8 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.996
Arch_1355
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR001308:IPR014731; KEGG: pac:PPA2213 putative electron transfer flavoprotein, carnitine metabolism (FixB protein); PFAM: Electron transfer flavoprotein alpha subunit; SPTR: D0WNZ8 Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
 
 0.996
Arch_1362
L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: ele:Elen_1833 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: D0WP05 Crotonobetainyl-CoA:carnitine CoA-transferase; PFAM: CoA-transferase family III.
 
 
 0.975
Arch_1360
InterPro IPR002539; KEGG: drm:Dred_0577 dehydratase; PFAM: MaoC domain protein dehydratase; PRIAM:3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-ch olest-24-enoyl-CoAhydratase; SPTR: D0WP03 Putative MaoC like domain protein; PFAM: MaoC like domain.
 
 0.968
Arch_1356
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR012255:IPR014730:IPR014729; KEGG: pac:PPA2214 putative electron transfer flavoprotein (FixA protein); PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ9 Putative electron transfer flavoprotein; PFAM: Electron transfer flavoprotein domain.
 
 
 0.967
Arch_0585
COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014729:IPR014730:IPR012255; KEGG: pac:PPA2214 putative electron transfer flavoprotein (FixA protein); PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: D0WNZ9 Putative electron transfer flavoprotein; PFAM: Electron transfer flavoprotein domain.
 
 
 0.965
Arch_1361
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873:IPR017871; KEGG: ele:Elen_1832 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: D0WP04 CoA ligase; PFAM: AMP-binding enzyme.
 
  
 0.887
Arch_1365
Major facilitator superfamily MFS_1; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701:IPR016196; KEGG: ele:Elen_1836 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: D0WP08 Transporter, major facilitator family; PFAM: Major Facilitator Superfamily.
 
     0.865
Arch_1364
Alpha/beta hydrolase fold-3 domain protein; COGs: COG0657 Esterase/lipase; InterPro IPR013094:IPR002168; KEGG: ele:Elen_1835 alpha/beta hydrolase fold-3 domain protein; PFAM: Alpha/beta hydrolase fold-3 domain protein; SPTR: D0WP07 Acetyl esterase; PFAM: alpha/beta hydrolase fold.
 
  
 0.825
Arch_0346
COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR001078:IPR001017:IPR005475:IPR011603; KEGG: bcv:Bcav_1274 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes; SPTR: D0WRR3 Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2- [...]
  
 0.819
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.