STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1422KEGG: bcv:Bcav_1208 hypothetical protein; SPTR: D0WPI0 Putative uncharacterized protein. (489 aa)    
Predicted Functional Partners:
Arch_1423
COGs: COG1216 glycosyltransferase; KEGG: bcv:Bcav_1207 glycosyl transferase domain-containing protein; SPTR: D0WPI1 Putative glycosyl transferase domain protein.
 
  
 0.964
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.866
Arch_1808
KEGG: bcv:Bcav_4209 hypothetical protein; SPTR: D0WL37 Putative uncharacterized protein.
 
     0.759
Arch_1425
KEGG: xce:Xcel_2550 hypothetical protein; SPTR: D1BWZ7 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR03089.
 
    0.750
Arch_1614
KEGG: bcv:Bcav_0899 DNA helicase; SPTR: D0WJR7 Putative uncharacterized protein.
  
    0.747
Arch_1417
Lipoprotein LpqB, GerMN domain protein; InterPro IPR019606:IPR018910; KEGG: bcv:Bcav_1242 lipoprotein LpqB; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, beta-propeller domain-like; SPTR: D0WPH3 Putative lipoprotein LpqB; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
 
     0.737
Arch_0242
KEGG: xce:Xcel_3007 hypothetical protein; SPTR: A7BBM1 Putative uncharacterized protein.
  
    0.716
Arch_0016
Hypothetical protein; InterPro IPR016181; KEGG: cai:Caci_8064 GCN5-related N-acetyltransferase; SPTR: C0UD33 Acetyltransferase (GNAT) family protein.
 
    0.708
Arch_0223
KEGG: bcv:Bcav_3418 hypothetical protein; SPTR: C5C235 Putative uncharacterized protein.
  
     0.704
Arch_0317
Hypothetical protein; KEGG: bcv:Bcav_1258 ATPase involved in chromosome partitioning; SPTR: C2BSE5 ATPase involved in chromosome partitioning family protein.
 
     0.704
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.