STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1452KEGG: krh:KRH_07740 hypothetical protein; SPTR: C6RBJ7 Putative uncharacterized protein. (181 aa)    
Predicted Functional Partners:
Arch_0305
Proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR001750:IPR010227:IPR003918; KEGG: bcv:Bcav_3217 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: D0WMH3 NADH-quinone oxidoreductase, M subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.
    
 
 0.863
Arch_0139
KEGG: bcv:Bcav_2625 hypothetical protein; SPTR: D0WKD8 Putative uncharacterized protein.
   
 0.818
Arch_1036
Sulphate transporter; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR002645:IPR006162:IPR011547; KEGG: gbr:Gbro_3908 sulphate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: D0L3T1 Sulphate transporter; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1.
    
   0.604
Arch_1451
Isocitrate dehydrogenase, NADP-dependent; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: sma:SAV_7214 isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Q826H9 Putative isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; Belongs to the monomeric-type IDH family.
       0.577
Arch_0106
COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: jde:Jden_0175 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: D0WKW9 Putative FHA domain protein; PFAM: FHA domain.
    
  0.552
Arch_0107
COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: bcv:Bcav_0032 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1RFN6 FHA domain-containing protein; PFAM: Protein of unknown function (DUF2662); FHA domain.
    
  0.552
Arch_0871
COGs: COG1716 FOG: FHA domain; InterPro IPR008984:IPR000253; KEGG: bcv:Bcav_2102 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: D0WMV9 GarA protein; PFAM: FHA domain.
    
  0.552
Arch_0580
Peptidase S8 and S53 subtilisin kexin sedolisin; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209:IPR014877; KEGG: pac:PPA0598 serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Exportin 1-like; SPTR: Q6AA63 Serine protease, subtilase family; PFAM: Subtilase family; Belongs to the peptidase S8 family.
   
 
 0.433
Arch_0581
KEGG: krh:KRH_16080 hypothetical protein; SPTR: B2GKR9 Putative uncharacterized protein.
   
 
 0.433
Arch_0968
KEGG: jde:Jden_1097 hypothetical protein; SPTR: D0WN42 Putative uncharacterized protein.
   
 
 0.433
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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