STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1456KEGG: krh:KRH_21190 hypothetical protein; SPTR: C2BVW5 Putative uncharacterized protein. (132 aa)    
Predicted Functional Partners:
Arch_1455
Alpha/beta hydrolase fold protein; InterPro IPR000073:IPR002410; KEGG: cef:CE0596 putative prolyl aminopeptidase; PFAM: alpha/beta hydrolase fold; SPTR: Q8FS10 Putative prolyl aminopeptidase; PFAM: alpha/beta hydrolase fold.
  
    0.604
Arch_1454
COGs: COG3971 2-keto-4-pentenoate hydratase; InterPro IPR002529:IPR011234; KEGG: bja:blr1240 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: 2-oxopent-4-enoate hydratase; SPTR: Q89V18 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
       0.581
Arch_1284
Phage shock protein C, PspC; InterPro IPR007168; KEGG: rsa:RSal33209_0977 putative stress-responsive transcriptional regulator; PFAM: PspC domain protein; SPTR: C0W6P9 Possible phage shock protein C, PspC; PFAM: PspC domain; TIGRFAM: LPXTG-motif cell wall anchor domain.
  
    0.476
Arch_0256
Membrane-flanked domain protein; COGs: COG3402 conserved hypothetical protein; InterPro IPR005182; KEGG: rsa:RSal33209_3209 permease; PFAM: membrane-flanked domain; SPTR: A9WUQ5 Permease; PFAM: Bacterial membrane flanked domain.
   
    0.415
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
       0.404
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.