STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1465Hypothetical protein; InterPro IPR008979; KEGG: pac:PPA1821 putative sialidase; SPTR: Q6A6R6 Putative sialidase. (109 aa)    
Predicted Functional Partners:
Arch_1464
Coagulation factor 5/8 type domain protein; InterPro IPR000421:IPR008979; KEGG: coc:Coch_0195 glycoside hydrolase family 2 TIM barrel; PFAM: coagulation factor 5/8 type domain protein; SPTR: A3TGR0 Putative membrane protein; PFAM: F5/8 type C domain.
       0.613
Arch_1466
COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR002177:IPR008331:IPR012347:IPR009078; KEGG: pac:PPA2134 starvation-inducible DNA-binding protein or fine tangled pili major subunit; PFAM: Ferritin Dps family protein; SPTR: A7BBG2 Putative uncharacterized protein; PFAM: Ferritin-like domain; Belongs to the Dps family.
       0.533
Arch_1463
Rhodanese domain protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: bba:Bd0919 phage shock protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: C0W0D3 Rhodanese domain protein; PFAM: Rhodanese-like domain.
       0.524
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.