STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1475COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR011031:IPR005126:IPR017571; KEGG: mxa:MXAN_2210 putative cytochrome c nitrite reductase, small subunit NrfH; PFAM: NapC/NirT cytochrome c domain protein; SPTR: Q1DA91 Putative cytochrome c nitrite reductase, small subunit NrfH; TIGRFAM: cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit. (168 aa)    
Predicted Functional Partners:
Arch_1474
COGs: COG3303 Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit; InterPro IPR003321:IPR011031; KEGG: mxa:MXAN_2209 putative cytochrome c nitrite reductase, catalytic subunit NrfA; PFAM: cytochrome c552; PRIAM: Nitrite reductase (cytochrome; ammonia-forming); SPTR: B4CX41 Nitrite reductase (Cytochrome; ammonia-forming); PFAM: Cytochrome c552; Belongs to the cytochrome c-552 family.
 
 0.999
Arch_0202
COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterProIPR006097:IPR006096:IPR016040:IPR014362:IPR 006095; KEGG: jde:Jden_2359 glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: C0W243 Glutamate dehydrogenase; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.918
Arch_0729
COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746; KEGG: jde:Jden_1487 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: D0WQP4 Glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.
     
 0.900
Arch_0732
COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR014746:IPR004809; KEGG: kra:Krad_3291 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: D0WQN7 Glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.
     
 0.900
Arch_1473
Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR013026:IPR013105:IPR011990; KEGG: acp:A2cp1_3178 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SPTR: Q1K1D9 Tetratricopeptide TPR_2; PFAM: Tetratricopeptide repeat.
 
     0.895
Arch_1470
COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541:IPR017562; KEGG: dhd:Dhaf_3357 cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; SPTR: Q0PIF5 Cytochrome c biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
 
  
 0.824
Arch_1471
COGs: COG1333 ResB protein required for cytochrome c biosynthesis; InterPro IPR007816; KEGG: gem:GM21_3520 ResB family protein; PFAM: ResB family protein; SPTR: C6E5L7 ResB family protein; PFAM: ResB-like family.
 
  
 0.799
Arch_1256
Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR009010:IPR006311:IPR011888:IPR017909:IPR 006655:IPR019546:IPR006963:IPR006656:IPR006657; KEGG: pac:PPA0517 anaerobic dimethyl sulfoxide reductase chain A; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; SPTR: C2BU50 Possible Trimethylamine-N-oxide reductase (Cytochrome c); TIGRFAM: anaerobic dimethy [...]
  
 
 0.791
Arch_1472
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: mav:MAV_4618 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Q73SQ0 CcsA; PFAM: Cytochrome C biogenesis protein transmembrane region.
       0.645
Arch_1469
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COGs: COG1225 Peroxiredoxin; InterPro IPR017936:IPR000866:IPR012335:IPR012336; KEGG: bca:BCE_3632 AhpC/TSA family protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: C2MNU3 AhpC/TSA; PFAM: AhpC/TSA family.
 
     0.618
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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