STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1490Radical SAM domain protein; COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197; KEGG: tmz:Tmz1t_1479 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: D0YU66 Anaerobic sulfatase-maturating enzyme; PFAM: Radical SAM superfamily. (417 aa)    
Predicted Functional Partners:
Arch_1487
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917:IPR017849:IPR017850; KEGG: bfa:Bfae_28950 arylsulfatase A family protein; PFAM: sulfatase; SPTR: C0W1U3 Sulfatase; PFAM: Sulfatase.
 
 
 0.885
Arch_1491
InterPro IPR002781; KEGG: nml:Namu_0360 protein of unknown function DUF81; PFAM: protein of unknown function DUF81; SPTR: C0VYF1 Membrane permease protein; PFAM: Sulfite exporter TauE/SafE.
       0.790
Arch_1489
General substrate transporter; COGs: COG2814 Arabinose efflux permease; InterPro IPR005828:IPR016196:IPR005829; KEGG: kpn:KPN_03142 putative general substrate transporter; PFAM: General substrate transporter; SPTR: C0W1U5 Major facilitator family protein transporter; PFAM: Sugar (and other) transporter.
 
     0.584
Arch_1750
KEGG: bcv:Bcav_0376 hypothetical protein; SPTR: D0WK97 Putative uncharacterized protein.
  
 
 0.473
Arch_1754
KEGG: bcv:Bcav_0376 hypothetical protein; SPTR: C0VY58 Putative uncharacterized protein.
  
 
 0.473
Arch_0012
Aminoglycoside phosphotransferase; InterPro IPR002575:IPR011009; KEGG: blj:BLD_1766 putative homoserine kinase type II; PFAM: aminoglycoside phosphotransferase; SPTR: A7BJ81 N-acetylhexosamine kinase; PFAM: Phosphotransferase enzyme family.
  
     0.428
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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