STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1508Protein of unknown function DUF1112; COGs: COG4760 membrane protein; InterPro IPR010539; KEGG: jde:Jden_1900 protein of unknown function DUF1112; PFAM: protein of unknown function DUF1112; SPTR: D0WQ03 Putative integral membrane protein. (268 aa)    
Predicted Functional Partners:
Arch_0799
KEGG: bcv:Bcav_1965 hypothetical protein; SPTR: D0WQH2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3000).
  
     0.463
Arch_1509
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cef:CE2584 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WQ04 Bacitracin transport ATP-binding protein BcrA; PFAM: ABC transporter.
       0.460
Arch_1510
KEGG: sro:Sros_2509 hypothetical protein; SPTR: D0WQ05 Putative ABC transporter integral membrane protein.
       0.454
Arch_0004
Protein of unknown function DUF721; COGs: COG5512 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives; InterPro IPR007922; KEGG: bcv:Bcav_0005 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: D0WL05 Protein in RecF-GyrB intergenic region; PFAM: Protein of unknown function (DUF721).
  
     0.441
Arch_0711
KEGG: bcv:Bcav_1800 hypothetical protein; SPTR: C0W3X4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3145).
  
     0.420
Arch_1514
Protein of unknown function DUF501; COGs: COG1507 conserved hypothetical protein; InterPro IPR007511; KEGG: jde:Jden_1921 protein of unknown function DUF501; PFAM: protein of unknown function DUF501; SPTR: D0WQ08 Septum formation initiator family protein; PFAM: Protein of unknown function (DUF501).
 
     0.404
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.