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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1523ABC transporter related protein; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: rop:ROP_50810 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WQ28 ABC transporter, ATP-binding protein; PFAM: ABC transporter. (323 aa)    
Predicted Functional Partners:
Arch_1524
ABC-2 type transporter; COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: jde:Jden_1946 ABC-2 type transporter; SPTR: D0WQ29 Putative membrane protein.
 
  
 0.974
Arch_1643
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR017871:IPR003593:IPR008995:IPR003439; KEGG: xce:Xcel_2950 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W453 Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
     
0.900
Arch_0810
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: fma:FMG_0226 zinc ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C2D875 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
 
    
0.813
Arch_1522
Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR012287:IPR009057; KEGG: bcv:Bcav_0984 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: C5C059 Transcriptional regulator, TetR family; manually curated; PFAM: Bacterial regulatory proteins, tetR family.
       0.633
Arch_1250
thiamineS protein; InterPro IPR016155:IPR012675:IPR003749; KEGG: fre:Franean1_6174 thiamineS protein; PFAM: thiamineS protein; SPTR: D0WL89 Molybdopterin converting factor, subunit 1; PFAM: ThiS family.
  
     0.558
Arch_0414
ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439; KEGG: blt:Balat_1147 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SPTR: C6AJB3 Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.
  
     0.488
Arch_0400
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: xce:Xcel_3322 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WP13 Putative ABC transporter, ATP-binding protein.
  
     0.471
Arch_1152
ABC transporter related protein; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: rmu:RMDY18_18540 ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6R5X7 Glutamine transport ATP-binding protein GlnQ; PFAM: ABC transporter.
 
    
0.443
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.426
Arch_0738
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: cdi:DIP0585 putative iron transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q6NJ28 Putative iron transport system ATP-binding protein; PFAM: ABC transporter.
 
    
0.404
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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