STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Arch_1575ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003339:IPR003593:IPR017871; KEGG: lxx:Lxx21860 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; SPTR: C2BVY8 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter; Cobalt transport protein. (775 aa)    
Predicted Functional Partners:
Arch_0961
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR010066:IPR003439:IPR000515:IPR017871:IPR 003593:IPR013563; KEGG: ele:Elen_2148 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: A7BBZ1 Putative uncharacterized protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC trans [...]
  
 
 0.962
Arch_1576
InterPro IPR017195; KEGG: lxx:Lxx21850 ABC-type transporter, permease protein; PFAM: ABC-type thiamin-related transport system, permease component 1, predicted; SPTR: C2BVY9 ABC superfamily ATP binding cassette transporter, permease protein; PFAM: ABC-type cobalt transport system, permease component.
  
  
 0.958
Arch_1278
Phosphomethylpyrimidine kinase; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR013749:IPR004305:IPR016084:IPR004399; KEGG: pac:PPA0110 thiamine-phosphate pyrophosphorylase; PFAM: Phosphomethylpyrimidine kinase type-1; TENA/THI-4 domain protein; SPTR: Q6ABQ9 Putative thiamine biosynthesis protein; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TENA/THI-4/PQQC family; TIGRFAM: phosphomethylpyrimidine kinase.
  
  
 0.849
Arch_1183
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR017871:IPR003593; KEGG: ckp:ckrop_1533 ABC transport system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C4LKA7 ABC transport system, ATP-binding protein; PFAM: ABC transporter.
 
0.841
Arch_1574
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR001140:IPR003593:IPR 011527:IPR017871; KEGG: ele:Elen_3091 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C2BVY7 ABC superfamily ATP binding cassette transporter, ABC/membrane protein; PFAM: ABC transporter; ABC transporter transmembrane region.
 
    
0.765
Arch_1573
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR003593:IPR011527:IPR 017871; KEGG: ele:Elen_3090 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C2BVY6 ABC superfamily ATP binding cassette transporter, ABC/membrane protein; PFAM: ABC transporter transmembrane region; ABC transporter.
 
    
0.751
Arch_1184
Cobalt transport protein; InterPro IPR003339; KEGG: car:cauri_0787 putative ABC transport system, permease protein; PFAM: cobalt transport protein; SPTR: D0YS34 Putative ABC transporter associated permease; PFAM: Cobalt transport protein.
 
 
 0.706
Arch_1577
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: cth:Cthe_1701 recombinase; PFAM: Resolvase domain; Recombinase; SPTR: C8RU75 Phage integrase family site-specific recombinase; PFAM: Recombinase; Resolvase, N terminal domain.
 
    0.701
Arch_1578
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: spa:M6_Spy1124 site-specific recombinase; PFAM: Resolvase domain; Recombinase; SPTR: C8RU76 Resolvase family prophage LambdaSa04, site-specific recombinase; PFAM: Recombinase; Resolvase, N terminal domain.
 
    0.688
Arch_0054
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: pac:PPA2065 dipeptide transport system permease protein DppC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q6A635 Dipeptide transport system permease protein DppC; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.655
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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