STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Arch_1593TatD-related deoxyribonuclease; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR012278; KEGG: bcv:Bcav_0972 hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; SPTR: D0WQ46 Putative deoxyribonuclease; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family. (317 aa)    
Predicted Functional Partners:
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 0.903
Arch_1592
G5 domain protein; COGs: COG3583 conserved hypothetical protein; InterPro IPR011098:IPR007137; KEGG: bcv:Bcav_0973 G5 domain protein; PFAM: G5 domain protein; protein of unknown function DUF348; SPTR: C5C048 G5 domain protein; PFAM: Domain of unknown function (DUF348); G5 domain.
 
   
 0.836
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.828
ispE
4-diphosphocytidyl-2C-methyl-D-erythritolkinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
     
 0.676
Arch_1595
Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: jde:Jden_1959 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: D0WQ48 Pyrazinamidase/nicotinamidase; PFAM: Isochorismatase family.
  
    0.589
Arch_0451
Single-strand binding protein; InterPro IPR012340:IPR000424:IPR011344:IPR016027; KEGG: ach:Achl_2173 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: D0WRE4 Single-stranded DNA-binding protein 1; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
 
    0.450
Arch_1586
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003593:IPR003439; KEGG: mlu:Mlut_05410 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W7V6 ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
       0.437
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.402
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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