STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Arch_1601ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: jde:Jden_0115 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7R5B2 ABC transporter related; PFAM: ABC transporter. (305 aa)    
Predicted Functional Partners:
Arch_1602
KEGG: xce:Xcel_1905 ABC-2 type transporter; SPTR: D1BT82 ABC-2 type transporter.
 
  
 0.971
Arch_1603
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: kse:Ksed_01000 signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: C2BTB8 Two component system histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.794
Arch_1604
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterProIPR001789:IPR000792:IPR011006:IPR016032:IPR 011991; KEGG: rer:RER_47120 NarL family two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: C0ZN12 Putative NarL family two-component response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
    0.792
Arch_1600
Domain of unknown function DUF1791; COGs: COG1416 conserved hypothetical protein; InterPro IPR014865; KEGG: chy:CHY_1266 hypothetical protein; PFAM: Domain of unknown function DUF1791; SPTR: Q3ACN4 Putative uncharacterized protein; PFAM: DsrE/DsrF-like family.
       0.576
Arch_1440
ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR001140:IPR011527:IPR 017871; KEGG: bcv:Bcav_3041 ABC transporter transmembrane region; PFAM: ABC transporter transmembrane region; ABC transporter related; SPTR: D0WKT9 Putative ABC transporter; PFAM: ABC transporter transmembrane region; ABC transporter.
  
  0.490
Arch_1597
MMPL domain protein; COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731:IPR004869; KEGG: ach:Achl_3628 MmpL domain protein; PFAM: MMPL domain protein; SPTR: C1RG49 Predicted RND superfamily drug exporter; PFAM: MMPL family.
 
     0.479
Arch_0551
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439:IPR017940:IPR003593:IPR011527; KEGG: pac:PPA0784 ABC-type transport system, fused ATPase and permease; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D0WRL0 ABC-type transport system, fused ATPase and permease; PFAM: ABC transporter transmembrane region; ABC transporter.
  
  0.469
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
 
   0.426
Arch_1527
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439:IPR003593; KEGG: bln:Blon_1030 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B7GQP6 ABC transporter related; PFAM: ABC transporter.
  
 
0.418
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
    0.411
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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