STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1623Chromogranin/secretogranin; InterPro IPR001990; KEGG: xce:Xcel_2933 hypothetical protein; PFAM: Chromogranin/secretogranin; SPTR: D0WJT5 Putative secreted protein. (639 aa)    
Predicted Functional Partners:
Arch_1624
COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: xce:Xcel_2934 phage shock protein A, PspA; PFAM: PspA/IM30 family protein; SPTR: D0WJT6 PspA/IM30 family protein; PFAM: PspA/IM30 family.
 
    0.903
Arch_0312
KEGG: bcv:Bcav_1253 hypothetical protein; SPTR: D0WRM8 Putative uncharacterized protein.
  
     0.650
Arch_0242
KEGG: xce:Xcel_3007 hypothetical protein; SPTR: A7BBM1 Putative uncharacterized protein.
  
     0.643
Arch_1068
InterPro IPR011251; KEGG: bcv:Bcav_1628 hypothetical protein; SPTR: D0WNB4 Nitrilotriacetate monooxygenase.
  
     0.605
Arch_1620
Mannose-6-phosphate isomerase, class I; COGs: COG1482 Phosphomannose isomerase; InterProIPR018050:IPR011051:IPR016305:IPR001250:IPR 014710; KEGG: bcv:Bcav_0860 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: D0WJT2 Mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I.
 
     0.604
Arch_1622
Cold-shock DNA-binding domain protein; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR016027:IPR002059:IPR012340; KEGG: bcv:Bcav_0848 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: D0WJT4 Cold-shock domain protein; PFAM: 'Cold-shock' DNA-binding domain.
     
 0.602
Arch_0374
KEGG: bcv:Bcav_1331 hypothetical protein; SPTR: D0WRU5 Putative uncharacterized protein (Fragment).
  
     0.594
Arch_1621
KEGG: kra:Krad_3581 hypothetical protein; SPTR: D0WJT3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3027).
       0.592
Arch_0870
InterPro IPR009061:IPR000551; KEGG: bcv:Bcav_2101 transcriptional regulator, MerR family; SMART: regulatory protein MerR; SPTR: D0WMW0 Regulatory protein, MerR family.
  
     0.550
Arch_0255
KEGG: xce:Xcel_2983 hypothetical protein; SPTR: D1BZ92 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3180).
  
     0.543
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.