STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1644KEGG: bcv:Bcav_0782 hypothetical protein; SPTR: C0VYH1 Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family. (435 aa)    
Predicted Functional Partners:
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.921
Arch_1643
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR017871:IPR003593:IPR008995:IPR003439; KEGG: xce:Xcel_2950 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0W453 Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter; Belongs to the ABC transporter superfamily.
  
    0.696
crgA
Protein of unknown function UPF0233; Involved in cell division; Belongs to the CrgA family.
  
     0.577
Arch_0833
KEGG: kse:Ksed_08870 hypothetical protein; SPTR: D0WQD8 Putative ATP/GTP-binding protein; PFAM: Dynamin family.
  
     0.552
Arch_0214
KEGG: bcv:Bcav_3430 hypothetical protein; SPTR: D0WM32 Putative uncharacterized protein.
  
     0.491
Arch_0834
GTP-binding protein HSR1-related protein; InterPro IPR002917; KEGG: kse:Ksed_08880 predicted GTPase; PFAM: GTP-binding protein HSR1-related; SPTR: C0W3Q0 ATP/GTP-binding protein; PFAM: GTPase of unknown function.
  
     0.489
Arch_1641
DSBA oxidoreductase; InterPro IPR012336:IPR001853:IPR012335; KEGG: xce:Xcel_2947 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: D0WJV3 Putative uncharacterized protein; PFAM: DSBA-like thioredoxin domain.
 
     0.451
Arch_0129
Protein of unknown function DUF2183; COGs: COG4850 conserved hypothetical protein; InterPro IPR019236; KEGG: cgl:NCgl2176 hypothetical protein; PFAM: Protein of unknown function DUF2183; SPTR: D0WKK5 ABC transporter, ATP-binding protein; PFAM: Uncharacterized conserved protein (DUF2183).
  
     0.450
Arch_0107
COGs: COG1716 FOG: FHA domain; InterPro IPR000253:IPR008984; KEGG: bcv:Bcav_0032 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1RFN6 FHA domain-containing protein; PFAM: Protein of unknown function (DUF2662); FHA domain.
  
     0.415
Arch_0174
LPXTG-motif cell wall anchor domain protein; COGs: COG2374 extracellular nuclease; InterPro IPR005135:IPR019931; KEGG: cgb:cg2868 extracellular nuclease; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: C0WGX8 Endonuclease/exonuclease/phosphatase; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: LPXTG-motif cell wall anchor domain.
  
     0.414
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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