STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1690TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: apr:Apre_1805 TraG family protein; PFAM: TRAG family protein; SPTR: C2BRH0 TraG/TraD family protein; PFAM: TraG/TraD family. (560 aa)    
Predicted Functional Partners:
Arch_1685
InterPro IPR005094; KEGG: lxx:Lxx07700 mobilization protein; PFAM: Relaxase/mobilization nuclease family protein; SPTR: C2BRG6 Possible mobilization protein; PFAM: Relaxase/Mobilisation nuclease domain.
 
   
 0.958
Arch_1694
Transfer complex protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: lxx:Lxx07680 transfer complex protein; SPTR: C2BRH4 Transfer complex protein; PFAM: Domain of unknown function DUF87.
 
  
 0.854
Arch_1686
KEGG: efa:EF2329 hypothetical protein; SPTR: C2BRG7 Putative uncharacterized protein.
       0.796
Arch_1535
KEGG: bln:Blon_1670 hypothetical protein; SPTR: C2BRH1 Putative uncharacterized protein.
 
     0.790
Arch_1684
Mobilisation protein; InterPro IPR008687; KEGG: lxx:Lxx07715 hypothetical protein; PFAM: mobilisation protein; SPTR: Q6AG08 Putative uncharacterized protein; PFAM: Bacterial mobilisation protein (MobC).
       0.785
Arch_1692
KEGG: bln:Blon_1670 hypothetical protein; SPTR: C2BRH1 Putative uncharacterized protein.
 
     0.784
Arch_1689
Hypothetical protein; KEGG: bpu:BPUM_2986 LacI family transcriptional regulator; SPTR: B6Q5I9 Pogo transposable element, putative.
       0.773
Arch_1687
KEGG: lhk:LHK_01554 hypothetical protein; SPTR: A7B3X1 Putative uncharacterized protein.
       0.768
Arch_1688
KEGG: hsl:OE4030F hypothetical protein; SPTR: C0D047 Sensor protein (Fragment).
       0.768
Arch_1184
Cobalt transport protein; InterPro IPR003339; KEGG: car:cauri_0787 putative ABC transport system, permease protein; PFAM: cobalt transport protein; SPTR: D0YS34 Putative ABC transporter associated permease; PFAM: Cobalt transport protein.
  
     0.722
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.