STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1692KEGG: bln:Blon_1670 hypothetical protein; SPTR: C2BRH1 Putative uncharacterized protein. (270 aa)    
Predicted Functional Partners:
Arch_1694
Transfer complex protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: lxx:Lxx07680 transfer complex protein; SPTR: C2BRH4 Transfer complex protein; PFAM: Domain of unknown function DUF87.
 
   
 0.918
Arch_1690
TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: apr:Apre_1805 TraG family protein; PFAM: TRAG family protein; SPTR: C2BRH0 TraG/TraD family protein; PFAM: TraG/TraD family.
 
     0.784
Arch_1693
COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR007921:IPR008258; KEGG: sgr:SGR_3923 putative secreted transglycosylase; PFAM: Lytic transglycosylase catalytic; CHAP domain containing protein; SPTR: C0BU72 Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; CHAP domain.
     
 0.776
Arch_0064
Peptidase S1 and S6 chymotrypsin/Hap; InterPro IPR001254:IPR009003:IPR001314:IPR018114; KEGG: cdi:DIP0736 putative protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; SPTR: C2BVZ1 Protease; PFAM: Trypsin.
  
     0.765
Arch_0065
KEGG: cdi:DIP0737 hypothetical protein; SPTR: C2BVZ2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF418).
  
     0.748
Arch_1685
InterPro IPR005094; KEGG: lxx:Lxx07700 mobilization protein; PFAM: Relaxase/mobilization nuclease family protein; SPTR: C2BRG6 Possible mobilization protein; PFAM: Relaxase/Mobilisation nuclease domain.
 
     0.738
Arch_1695
KEGG: bln:Blon_0504 hypothetical protein; SPTR: C2BRH5 Putative uncharacterized protein.
       0.654
Arch_1696
KEGG: bln:Blon_1669 hypothetical protein; SPTR: C2BRH6 Putative uncharacterized protein.
       0.629
Arch_1257
Putative transcriptional regulator, TetR family; InterPro IPR009057:IPR001647; KEGG: oih:OB3184 transcriptional regulator; SPTR: C2BU51 Putative uncharacterized protein.
  
     0.576
Arch_0405
Protein of unknown function DUF214; InterPro IPR003838; KEGG: sro:Sros_4389 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: D0YQR0 Putative efflux ABC transporter, permease protein; PFAM: Predicted permease.
  
     0.555
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.