STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1693COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR007921:IPR008258; KEGG: sgr:SGR_3923 putative secreted transglycosylase; PFAM: Lytic transglycosylase catalytic; CHAP domain containing protein; SPTR: C0BU72 Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; CHAP domain. (547 aa)    
Predicted Functional Partners:
Arch_1694
Transfer complex protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: lxx:Lxx07680 transfer complex protein; SPTR: C2BRH4 Transfer complex protein; PFAM: Domain of unknown function DUF87.
  
  
 0.852
Arch_1692
KEGG: bln:Blon_1670 hypothetical protein; SPTR: C2BRH1 Putative uncharacterized protein.
     
 0.774
Arch_1695
KEGG: bln:Blon_0504 hypothetical protein; SPTR: C2BRH5 Putative uncharacterized protein.
       0.608
Arch_1696
KEGG: bln:Blon_1669 hypothetical protein; SPTR: C2BRH6 Putative uncharacterized protein.
       0.599
Arch_0657
Peptidoglycan-binding lysin domain protein; InterPro IPR002482:IPR018392; KEGG: art:Arth_1469 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: D0WQY1 Putative LysM domain protein.
  
  
 0.550
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
  
 0.520
Arch_1691
InterPro IPR019284; KEGG: ckr:CKR_2857 hypothetical protein; PFAM: Protein of unknown function DUF2335, membrane; SPTR: B9E5Y3 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2335).
       0.452
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.407
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.404
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.