STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arch_1715KEGG: bcv:Bcav_0620 hypothetical protein; SPTR: D0WK42 Type II secretion system protein. (223 aa)    
Predicted Functional Partners:
Arch_1714
KEGG: bcv:Bcav_0621 type II secretion system protein; SPTR: D0WK41 Putative integral membrane protein.
     0.959
Arch_1716
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: bcv:Bcav_0619 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: D0WK43 Pilus assembly protein CpaF; PFAM: Type II/IV secretion system protein.
  
  
 0.881
Arch_1717
Hypothetical protein; InterPro IPR019775; KEGG: bcv:Bcav_0618 hypothetical protein; SPTR: D0WK44 Putative septum site determining protein.
       0.800
Arch_1611
SAF domain protein; InterPro IPR013974; KEGG: bcv:Bcav_0901 SAF domain protein; PFAM: SAF domain protein; SPTR: D0WJR4 Flp pilus assembly protein CpaB family protein; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.696
Arch_1226
InterPro IPR018076; KEGG: bcv:Bcav_2789 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: C5BYD4 Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.692
Arch_1423
COGs: COG1216 glycosyltransferase; KEGG: bcv:Bcav_1207 glycosyl transferase domain-containing protein; SPTR: D0WPI1 Putative glycosyl transferase domain protein.
  
     0.646
Arch_0375
KEGG: bcv:Bcav_1332 hypothetical protein; SPTR: D0WRU7 Putative uncharacterized protein.
  
     0.632
Arch_0095
KEGG: rsa:RSal33209_0014 hypothetical protein; SPTR: A9WR40 Putative uncharacterized protein.
  
     0.598
Arch_1224
KEGG: xce:Xcel_1029 TadE family protein; SPTR: A1R814 Putative TadE-like family protein.
 
  
 0.596
Arch_0824
InterPro IPR003849; KEGG: xce:Xcel_1669 preprotein translocase, YajC subunit; PFAM: YajC family protein; SPTR: D0WQE7 Putative preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit.
  
     0.529
Your Current Organism:
Arcanobacterium haemolyticum
NCBI taxonomy Id: 644284
Other names: A. haemolyticum DSM 20595, Arcanobacterium haemolyticum ATCC 9345, Arcanobacterium haemolyticum CIP 103370, Arcanobacterium haemolyticum DSM 20595, Arcanobacterium haemolyticum str. DSM 20595, Arcanobacterium haemolyticum strain DSM 20595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.