STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps3aePFAM: ribosomal protein S3Ae; KEGG: mbu:Mbur_2336 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. (196 aa)    
Predicted Functional Partners:
rpl37e
Ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
 
 
 0.999
rps15
PFAM: Ribosomal S13S15 domain protein; ribosomal protein S15; KEGG: mbu:Mbur_2345 30S ribosomal protein S15P.
 
 0.999
rpl18e
PFAM: ribosomal protein L15; KEGG: mbu:Mbur_2388 50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.
 
 
 0.999
rpl13
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
 
 0.999
rps9
KEGG: mbu:Mbur_2390 30S ribosomal protein S9P; TIGRFAM: ribosomal protein S9P; PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
rps2
Ribosomal protein S2; KEGG: mbu:Mbur_2393 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
 
 0.999
eif2b
Translation initiation factor aIF-2, beta subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family.
 
 0.999
rps24e
PFAM: Ribosomal protein S24e; KEGG: mma:MM_0599 30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.999
rpl37ae
Ribosomal protein L37a; Binds to the 23S rRNA.
 
 
 0.999
rpl15e
PFAM: Ribosomal protein L15e; KEGG: mbu:Mbur_0192 50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.
 
 
 0.999
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.