Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rpl31ePFAM: Ribosomal protein L31e; KEGG: mbu:Mbur_0114 50S ribosomal protein L31e; Belongs to the ribosomal protein L31e family. (88 aa)    
Predicted Functional Partners:
rpl44e
Ribosomal protein L44E; Binds to the 23S rRNA.
  
 0.999
rpl18e
PFAM: ribosomal protein L15; KEGG: mbu:Mbur_2388 50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.
  
 0.998
rpl18a
PFAM: Ribosomal LX protein; KEGG: mba:Mbar_A0460 50S ribosomal protein LX.
  
 0.998
rpl39e
KEGG: mbu:Mbur_0115 50S ribosomal protein L39e; manually curated; PFAM: Ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family.
 
 
 0.998
rps19e
Ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
 
 
 0.998
rpl30
KEGG: mma:MM_2145 50S ribosomal protein L30P; TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30.
  
 0.998
rpl19e
Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.998
rpl32e
PFAM: Ribosomal protein L32e; KEGG: mbu:Mbur_0018 50S ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family.
   
 0.998
rpl22
Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
  
 0.998
rpl3
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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