STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI73707.1KEGG: mbu:Mbur_1188 hypothetical protein. (341 aa)    
Predicted Functional Partners:
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.834
ADI73008.1
KEGG: mbu:Mbur_1854 putative ATPase RIL; PFAM: ABC transporter related; metal-binding domain in RNase L inhibitor, RLI; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SMART: AAA ATPase.
   
 
 0.806
tuf
Translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
 0.789
ADI75063.1
KEGG: mbu:Mbur_0155 hypothetical protein.
  
     0.708
rps3
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.701
rpl18a
PFAM: Ribosomal LX protein; KEGG: mba:Mbar_A0460 50S ribosomal protein LX.
  
  0.691
ADI73705.1
PFAM: GHMP kinase; KEGG: mba:Mbar_A3255 pantothenate kinase.
 
     0.683
rps3ae
PFAM: ribosomal protein S3Ae; KEGG: mbu:Mbur_2336 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.661
rpl23
Ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
   
 0.658
rpl15e
PFAM: Ribosomal protein L15e; KEGG: mbu:Mbur_0192 50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.
 
 0.653
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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