Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADI73808.1Rhodanese domain protein; KEGG: mba:Mbar_A2729 hydrolase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein. (454 aa)    
Predicted Functional Partners:
ADI72971.1
KEGG: mba:Mbar_A0944 hypothetical protein.
 
 0.951
ADI74378.1
PFAM: Protein of unknown function DUF2088; KEGG: mac:MA1313 hypothetical protein.
     
  0.900
ADI73807.1
KEGG: sfu:Sfum_0406 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; Rubrerythrin; SMART: Rhodanese domain protein.
 
   
0.757
rps17
Ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
 
   0.681
ADI73427.1
PFAM: protein of unknown function DUF81; KEGG: mbu:Mbur_0246 hypothetical protein.
 
  
 0.675
ADI74016.1
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mac:MA1389 holocytochrome-c synthase.
     
 0.628
rpl11
Ribosomal protein L11-like protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.591
rpl13
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.578
rpl3
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.575
rpl15
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
  
   0.570
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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