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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI73951.1PFAM: aminotransferase class V; KEGG: mma:MM_0246 serine-pyruvate aminotransferase. (383 aa)    
Predicted Functional Partners:
ADI73949.1
KEGG: mba:Mbar_A2082 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase.
     
 0.815
ADI73950.1
TIGRFAM: riboflavin synthase; KEGG: mma:MM_0245 riboflavin synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase.
       0.800
ADI73948.1
PFAM: aminotransferase class I and II; KEGG: mbu:Mbur_0428 aspartate aminotransferase.
  
 
 0.757
rpl40e
KEGG: mac:MA3970 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 
  0.662
ADI73238.1
TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: mbu:Mbur_2385 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein.
 
  
 0.642
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.620
purD
TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: mba:Mbar_A3513 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; Belongs to the GARS family.
  
  
 0.619
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.609
ribL
Cytidyltransferase-related domain protein; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.
 
  
 0.607
ADI73952.1
KEGG: mbu:Mbur_0512 XRE family transcriptional regulator; PFAM: CBS domain containing protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; CBS domain containing protein.
       0.589
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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