STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI73991.1KEGG: mbu:Mbur_1268 radical SAM family Fe-S protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (315 aa)    
Predicted Functional Partners:
ADI73466.1
Nitrogenase; KEGG: mbu:Mbur_1038 nitrogenase iron protein subunit NifH; PFAM: NifH/frxC-family protein.
 
  
 0.841
ADI73992.1
KEGG: mbu:Mbur_1267 AIR synthase related protein; TIGRFAM: methanogenesis marker protein 2; PFAM: AIR synthase related protein; AIR synthase related protein domain protein.
 
     0.745
queE
Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
     
 0.642
ADI73988.1
PFAM: protein of unknown function DUF366; KEGG: mbu:Mbur_1271 hypothetical protein.
       0.621
ADI73990.1
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mbu:Mbur_1269 putative 6-pyruvoyl tetrahydropterin synthase.
       0.621
queC
exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
       0.589
ADI73467.1
KEGG: mma:MM_0515 hypothetical protein; TIGRFAM: methanogenesis marker 13 metalloprotein; PFAM: oxidoreductase/nitrogenase component 1.
 
  
 0.511
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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