STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADI74824.1KEGG: mma:MM_1087 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (252 aa)    
Predicted Functional Partners:
ADI74823.1
PFAM: SufBD protein; KEGG: mac:MA4407 hypothetical protein.
 
 0.999
ADI74905.1
PFAM: aminotransferase class V; KEGG: mbu:Mbur_2068 aminotransferase, class V.
 
  
 0.979
ADI74704.1
KEGG: cno:NT01CX_2282 NifU protein; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein.
  
  
 0.942
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
  
  
 0.606
ADI74580.1
TIGRFAM: DNA polymerase Pol2; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; KEGG: mbu:Mbur_1688 replicative DNA polymerase I; SMART: DNA-directed DNA polymerase B.
     
 0.574
ADI72979.1
KEGG: mbu:Mbur_1787 HesB/YadR/YfhF; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein.
  
 
 0.542
ADI74821.1
KEGG: mbu:Mbur_0081 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
0.516
ADI74822.1
Hypothetical protein; KEGG: tko:TK0169 MarR family transcriptional regulator.
       0.485
ADI74825.1
KEGG: mbu:Mbur_1560 hypothetical protein.
       0.478
ADI74819.1
PFAM: protein of unknown function DUF214; KEGG: mbu:Mbur_0078 hypothetical protein.
     
 0.469
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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