Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
srp19Ribonucleoprotein complex SRP, Srp19 component; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP. (99 aa)    
Predicted Functional Partners:
srp54
GTP-binding signal recognition particle SRP54 G- domain protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.991
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
   
 
 0.866
rpl30e
PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: mbu:Mbur_1175 50S ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family.
  
   0.705
rps8e
KEGG: mba:Mbar_A3465 30S ribosomal protein S8e; TIGRFAM: ribosomal protein S8e; PFAM: Ribosomal protein S8E.
 
    0.683
rps17e
PFAM: Ribosomal protein S17e; KEGG: mba:Mbar_A1149 30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.
  
   0.666
rpl15e
PFAM: Ribosomal protein L15e; KEGG: mbu:Mbur_0192 50S ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.
 
 
   0.658
ADI74506.1
PHP domain protein; KEGG: mba:Mbar_A3261 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein.
 
     0.656
rps3ae
PFAM: ribosomal protein S3Ae; KEGG: mbu:Mbur_2336 30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
  
   0.623
ADI74841.1
KEGG: mbu:Mbur_2134 hypothetical protein.
       0.623
rpl29
KEGG: mbu:Mbur_0008 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
   0.616
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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