STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oggDNA-(apurinic or apyrimidinic site) lyase; Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites (AP sites); Belongs to the type-2 OGG1 family. (217 aa)    
Predicted Functional Partners:
ADI74913.1
PFAM: ABC-3 protein; KEGG: mba:Mbar_A0996 zinc ABC transporter, permease protein.
       0.714
ADI74914.1
KEGG: mma:MM_1334 zinc ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.699
ADI74915.1
PFAM: periplasmic solute binding protein; KEGG: mbu:Mbur_1015 solute binding protein.
       0.662
ADI74916.1
Iron (metal) dependent repressor, DtxR family; KEGG: mac:MA0022 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor.
       0.502
Your Current Organism:
Methanohalobium evestigatum
NCBI taxonomy Id: 644295
Other names: M. evestigatum Z-7303, Methanohalobium evestigatum Z-7303, Methanohalobium evestigatum str. Z-7303, Methanohalobium evestigatum strain Z-7303
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