STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGTG_01786Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
GGTG_04111
Nitrate reductase.
    
  0.745
GGTG_07451
Uncharacterized protein.
    
  0.592
GGTG_12841
Mitochondrial ribosomal protein subunit S18.
    
  0.590
GGTG_05589
Uncharacterized protein.
    
  0.585
GGTG_06159
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
  0.585
GGTG_06669
30S ribosomal protein S6.
    
  0.585
GGTG_07308
Nucleoside diphosphate kinase.
    
  0.584
GGTG_11834
30S ribosomal protein S16.
    
  0.584
GGTG_00295
Mitochondrial ribosomal small subunit component.
    
  0.583
GGTG_01390
30S ribosomal protein S10.
    
  0.583
Your Current Organism:
Gaeumannomyces tritici
NCBI taxonomy Id: 644352
Other names: G. tritici R3-111a-1, Gaeumannomyces graminis var. tritici R3-111a-1, Gaeumannomyces tritici R3-111a-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.