Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GGTG_01394 | GGTG_01637 | J3NJG2 | J3NK55 | Uncharacterized protein. | SET1 complex component swd1. | 0.914 |
GGTG_01394 | GGTG_03639 | J3NJG2 | J3NQT3 | Uncharacterized protein. | SET domain-containing protein. | 0.564 |
GGTG_01394 | GGTG_05259 | J3NJG2 | J3NVE6 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.950 |
GGTG_01394 | GGTG_07102 | J3NJG2 | J3P0Q7 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.927 |
GGTG_01394 | GGTG_07572 | J3NJG2 | J3P224 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.938 |
GGTG_01394 | GGTG_08556 | J3NJG2 | J3P4X0 | Uncharacterized protein. | SET1 complex component ash2. | 0.893 |
GGTG_01394 | GGTG_09486 | J3NJG2 | J3PA40 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.892 |
GGTG_01394 | GGTG_12853 | J3NJG2 | J3PH73 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.892 |
GGTG_01394 | GGTG_13655 | J3NJG2 | J3PJH3 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.815 |
GGTG_01637 | GGTG_01394 | J3NK55 | J3NJG2 | SET1 complex component swd1. | Uncharacterized protein. | 0.914 |
GGTG_01637 | GGTG_03639 | J3NK55 | J3NQT3 | SET1 complex component swd1. | SET domain-containing protein. | 0.605 |
GGTG_01637 | GGTG_05259 | J3NK55 | J3NVE6 | SET1 complex component swd1. | Histone H2B; Belongs to the histone H2B family. | 0.800 |
GGTG_01637 | GGTG_07102 | J3NK55 | J3P0Q7 | SET1 complex component swd1. | Histone acetyltransferase type B subunit 2. | 0.727 |
GGTG_01637 | GGTG_07572 | J3NK55 | J3P224 | SET1 complex component swd1. | Histone H2A; Belongs to the histone H2A family. | 0.869 |
GGTG_01637 | GGTG_08496 | J3NK55 | J3P4Q9 | SET1 complex component swd1. | GRF zinc finger domain-containing protein. | 0.914 |
GGTG_01637 | GGTG_08556 | J3NK55 | J3P4X0 | SET1 complex component swd1. | SET1 complex component ash2. | 0.999 |
GGTG_01637 | GGTG_09486 | J3NK55 | J3PA40 | SET1 complex component swd1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.951 |
GGTG_01637 | GGTG_12853 | J3NK55 | J3PH73 | SET1 complex component swd1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.951 |
GGTG_03639 | GGTG_01394 | J3NQT3 | J3NJG2 | SET domain-containing protein. | Uncharacterized protein. | 0.564 |
GGTG_03639 | GGTG_01637 | J3NQT3 | J3NK55 | SET domain-containing protein. | SET1 complex component swd1. | 0.605 |
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