STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGTG_05289Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
GGTG_01637
SET1 complex component swd1.
    
 0.617
GGTG_08556
SET1 complex component ash2.
    
 0.617
GGTG_01249
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.610
GGTG_06958
Uncharacterized protein.
    
 0.602
GGTG_08119
UBA domain-containing protein.
    
 0.600
GGTG_00340
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.599
GGTG_08196
ULK/ULK protein kinase.
    
 0.596
GGTG_03438
Nucleoporin Nup157/170.
    
  0.585
GGTG_12999
Nucleoporin NIC96.
    
  0.580
GGTG_04066
Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.
    
 0.576
Your Current Organism:
Gaeumannomyces tritici
NCBI taxonomy Id: 644352
Other names: G. tritici R3-111a-1, Gaeumannomyces graminis var. tritici R3-111a-1, Gaeumannomyces tritici R3-111a-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.