STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGTG_06402Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
GGTG_05717
Uncharacterized protein.
    
 0.757
GGTG_02787
Transcription regulatory protein SWI3.
    
 0.726
GGTG_03963
Actl6a protein; Belongs to the actin family.
    
 0.726
GGTG_04235
SWIB domain-containing protein.
    
 0.726
GGTG_09539
Transcription regulatory protein SNF5.
    
 0.619
GGTG_11070
SWIB domain-containing protein.
    
 0.617
GGTG_00813
Uncharacterized protein.
    
 0.615
GGTG_05183
Chromatin structure-remodeling complex protein rsc1.
    
 0.615
GGTG_00368
F-box domain-containing protein.
    
 0.574
GGTG_00914
Uncharacterized protein.
    
 0.574
Your Current Organism:
Gaeumannomyces tritici
NCBI taxonomy Id: 644352
Other names: G. tritici R3-111a-1, Gaeumannomyces graminis var. tritici R3-111a-1, Gaeumannomyces tritici R3-111a-1
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